LOC_Os05g36900.1

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0009080 (SeedPlants) Phylogenetic Tree(s): OG_06_0009080_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g36900.1
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
GSVIVT01011138001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01016887001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Gb_23561	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_56828g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
Pp3c22_5870V3.1	No alias	TARGET OF MONOPTEROS 6	0.01	Archaeplastida
Solyc02g077960.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc02g090220.3.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc03g112930.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e012824_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e018163_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e023334_P001	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e027411_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e029641_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e032133_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	38	92

External Links

No external refs found!

LOC_Os05g36900.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation