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  5. LOC_Os05g39480.1

LOC_Os05g39480.1


Description : transcription factor (FAR1)


Gene families : OG0008742 (Archaeplastida) Phylogenetic Tree(s): OG0008742_tree ,
OG_05_0008126 (LandPlants) Phylogenetic Tree(s): OG_05_0008126_tree ,
OG_06_0005134 (SeedPlants) Phylogenetic Tree(s): OG_06_0005134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39480.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g63030.1 No alias transcription factor (FAR1) 0.12 Archaeplastida
LOC_Os02g31850.1 No alias transcription factor (FAR1) 0.06 Archaeplastida
LOC_Os11g17430.1 No alias transcription factor (FAR1) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 151 229
IPR018289 MULE_transposase_dom 353 446
IPR007527 Znf_SWIM 637 668
No external refs found!