LOC_Os05g39930.1


Description : U-box domain-containing protein 16 OS=Arabidopsis thaliana (sp|q9lzw3|pub16_arath : 378.0)


Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000690 (LandPlants) Phylogenetic Tree(s): OG_05_0000690_tree ,
OG_06_0001289 (SeedPlants) Phylogenetic Tree(s): OG_06_0001289_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39930.1
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00030110 evm_27.TU.AmTr_v1... U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.1 Archaeplastida
AMTR_s00153p00035720 evm_27.TU.AmTr_v1... U-box domain-containing protein 1 OS=Medicago truncatula 0.04 Archaeplastida
AT1G10560 PUB18, ATPUB18 plant U-box 18 0.04 Archaeplastida
AT1G71020 No alias ARM repeat superfamily protein 0.03 Archaeplastida
AT5G01830 No alias ARM repeat superfamily protein 0.03 Archaeplastida
AT5G42340 PUB15 Plant U-Box 15 0.04 Archaeplastida
GSVIVT01016225001 No alias U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021265001 No alias U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030205001 No alias U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.05 Archaeplastida
Gb_10871 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Gb_24091 No alias U-box domain-containing protein 14 OS=Arabidopsis... 0.04 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.06 Archaeplastida
LOC_Os02g49950.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
MA_29517g0010 No alias U-box domain-containing protein 12 OS=Oryza sativa... 0.02 Archaeplastida
MA_9917294g0010 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Pp3c10_4480V3.1 No alias plant U-box 13 0.02 Archaeplastida
Pp3c13_16440V3.1 No alias plant U-box 13 0.03 Archaeplastida
Smo415326 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.02 Archaeplastida
Smo75609 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.02 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.08 Archaeplastida
Solyc09g056450.4.1 No alias U-box domain-containing protein 9 OS=Arabidopsis... 0.05 Archaeplastida
Solyc11g008390.2.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Solyc12g094610.3.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e014377_P001 No alias U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e014566_P002 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e019429_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e023475_P001 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e028839_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e031915_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 276 345
IPR000225 Armadillo 408 446
No external refs found!