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  5. LOC_Os05g40400.1

LOC_Os05g40400.1


Description : no hits & (original description: none)


Gene families : OG0000858 (Archaeplastida) Phylogenetic Tree(s): OG0000858_tree ,
OG_05_0000544 (LandPlants) Phylogenetic Tree(s): OG_05_0000544_tree ,
OG_06_0000601 (SeedPlants) Phylogenetic Tree(s): OG_06_0000601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g40400.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00269390 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G64065 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
AT2G46150 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT3G54200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01026977001 No alias No description available 0.08 Archaeplastida
LOC_Os01g53470.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g02730.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g02700.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10435817g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c21_19270V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
Pp3c4_10010V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
Solyc08g008150.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g081700.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e009249_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e019888_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 88 180
No external refs found!