LOC_Os05g43820.1

Description : small GTPase (ROP)

Gene families : OG0000554 (Archaeplastida) Phylogenetic Tree(s): OG0000554_tree ,
OG_05_0000532 (LandPlants) Phylogenetic Tree(s): OG_05_0000532_tree ,
OG_06_0000373 (SeedPlants) Phylogenetic Tree(s): OG_06_0000373_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g43820.1
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00186910	evm_27.TU.AmTr_v1...	Multi-process regulation.Rop GTPase regulatory...	0.06	Archaeplastida
AT1G75840	ATROP4, ROP4,...	RAC-like GTP binding protein 5	0.05	Archaeplastida
AT2G44690	ARAC9, ATROP8, ROP8	Arabidopsis RAC-like 9	0.02	Archaeplastida
AT3G51300	ATRAC11, ARAC11,...	RHO-related protein from plants 1	0.03	Archaeplastida
AT4G35020	ARAC3, RAC3,...	RAC-like 3	0.03	Archaeplastida
AT5G45970	ARAC2, RAC2,...	RAC-like 2	0.02	Archaeplastida
GSVIVT01007804001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.03	Archaeplastida
GSVIVT01009947001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.04	Archaeplastida
GSVIVT01018319001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.03	Archaeplastida
GSVIVT01018729001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.04	Archaeplastida
GSVIVT01020653001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.03	Archaeplastida
GSVIVT01024029001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.03	Archaeplastida
LOC_Os02g20850.1	No alias	small GTPase (ROP)	0.03	Archaeplastida
LOC_Os06g12790.1	No alias	small GTPase (ROP)	0.04	Archaeplastida
MA_36432g0010	No alias	small GTPase (ROP)	0.03	Archaeplastida
Mp7g17540.1	No alias	small GTPase (ROP)	0.02	Archaeplastida
Solyc01g088780.3.1	No alias	small GTPase (ROP)	0.05	Archaeplastida
Solyc01g111560.3.1	No alias	small GTPase (ROP)	0.03	Archaeplastida
Solyc02g077400.4.1	No alias	small GTPase (ROP)	0.02	Archaeplastida
Solyc03g114070.3.1	No alias	small GTPase (ROP)	0.02	Archaeplastida
Solyc07g020800.3.1	No alias	small GTPase (ROP)	0.05	Archaeplastida
Zm00001e032127_P001	No alias	small GTPase (ROP)	0.06	Archaeplastida
Zm00001e036080_P001	No alias	small GTPase (ROP)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	9	179

External Links

No external refs found!

LOC_Os05g43820.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation