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Description : mRNA-binding regulatory factor (TZF)
Gene families : OG0001103 (Archaeplastida) Phylogenetic Tree(s): OG0001103_tree ,
OG_05_0000849 (LandPlants) Phylogenetic Tree(s): OG_05_0000849_tree ,
OG_06_0000726 (SeedPlants) Phylogenetic Tree(s): OG_06_0000726_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g45020.1 | |
| Cluster | HCCA: Cluster_270 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G19810 | No alias | CCCH-type zinc finger family protein | 0.04 | Archaeplastida | |
| AT4G29190 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.02 | Archaeplastida | |
| AT5G07500 | PEI1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.03 | Archaeplastida | |
| Cre03.g146267 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.01 | Archaeplastida | |
| GSVIVT01013901001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.04 | Archaeplastida | |
| Mp6g00540.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | Archaeplastida | |
| Solyc07g053750.1.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.04 | Archaeplastida | |
| Solyc12g008660.1.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | Archaeplastida | |
| Zm00001e016582_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | Archaeplastida | |
| Zm00001e027132_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | Archaeplastida | |
| Zm00001e032199_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.04 | Archaeplastida | |
| Zm00001e035805_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003993 | acid phosphatase activity | IEP | Neighborhood |
| MF | GO:0004474 | malate synthase activity | IEP | Neighborhood |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006097 | glyoxylate cycle | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0046487 | glyoxylate metabolic process | IEP | Neighborhood |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000571 | Znf_CCCH | 102 | 126 |
| No external refs found! |