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  5. LOC_Os05g47810.1

LOC_Os05g47810.1


Description : no hits & (original description: none)


Gene families : OG0000485 (Archaeplastida) Phylogenetic Tree(s): OG0000485_tree ,
OG_05_0002192 (LandPlants) Phylogenetic Tree(s): OG_05_0002192_tree ,
OG_06_0001237 (SeedPlants) Phylogenetic Tree(s): OG_06_0001237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g47810.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AT3G18295 No alias Protein of unknown function (DUF1639) 0.02 Archaeplastida
GSVIVT01035342001 No alias No description available 0.05 Archaeplastida
Solyc04g007340.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020120_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020122_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025739_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e026451_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e028091_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032335_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032376_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR012438 DUF1639 214 263
No external refs found!