LOC_Os05g47960.1


Description : no hits & (original description: none)


Gene families : OG0001341 (Archaeplastida) Phylogenetic Tree(s): OG0001341_tree ,
OG_05_0000895 (LandPlants) Phylogenetic Tree(s): OG_05_0000895_tree ,
OG_06_0000606 (SeedPlants) Phylogenetic Tree(s): OG_06_0000606_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g47960.1
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00042010 evm_27.TU.AmTr_v1... No description available 0.11 Archaeplastida
AMTR_s00105p00148840 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00105p00150760 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G18290 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
AT3G03280 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 Archaeplastida
GSVIVT01028106001 No alias No description available 0.1 Archaeplastida
Gb_05758 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_05765 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_05766 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_41646 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g03080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g49210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10428693g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_120551g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_120628g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_24094g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_38919g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_4761105g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_76101g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_7767108g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_897390g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9271818g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9762162g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp3g03220.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc02g091180.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc03g034410.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g007580.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e017110_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e025695_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e026461_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 168
No external refs found!