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  5. LOC_Os05g48810.1

LOC_Os05g48810.1


Description : co-chaperone (Hsp40)


Gene families : OG0000519 (Archaeplastida) Phylogenetic Tree(s): OG0000519_tree ,
OG_05_0000397 (LandPlants) Phylogenetic Tree(s): OG_05_0000397_tree ,
OG_06_0000303 (SeedPlants) Phylogenetic Tree(s): OG_06_0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48810.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00260500 evm_27.TU.AmTr_v1... DnaJ protein homolog 2 OS=Allium porrum 0.02 Archaeplastida
AT2G20560 No alias DNAJ heat shock family protein 0.08 Archaeplastida
GSVIVT01008076001 No alias DnaJ protein homolog 1 (Fragment) OS=Allium porrum 0.09 Archaeplastida
GSVIVT01021112001 No alias DnaJ protein ERDJ3B OS=Arabidopsis thaliana 0.09 Archaeplastida
Gb_01703 No alias co-chaperone (Hsp40) 0.06 Archaeplastida
Gb_04555 No alias co-chaperone (Hsp40) 0.05 Archaeplastida
Gb_28289 No alias co-chaperone (Hsp40) 0.02 Archaeplastida
Pp3c12_2810V3.1 No alias DNAJ heat shock family protein 0.02 Archaeplastida
Pp3c15_3820V3.1 No alias DNAJ heat shock family protein 0.02 Archaeplastida
Pp3c17_2260V3.1 No alias DNAJ heat shock family protein 0.02 Archaeplastida
Smo230025 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Solyc02g077670.3.1 No alias co-chaperone (Hsp40) 0.02 Archaeplastida
Solyc07g053615.1.1 No alias co-chaperone (Hsp40) 0.02 Archaeplastida
Zm00001e016355_P001 No alias co-chaperone (Hsp40) 0.09 Archaeplastida
Zm00001e026521_P002 No alias co-chaperone (Hsp40) 0.08 Archaeplastida
Zm00001e032418_P001 No alias co-chaperone (Hsp40) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002939 DnaJ_C 187 345
IPR001623 DnaJ_domain 4 67
No external refs found!