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  5. LOC_Os05g48900.1

LOC_Os05g48900.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48900.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224100 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.06 Archaeplastida
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.1 Archaeplastida
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.11 Archaeplastida
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.05 Archaeplastida
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.12 Archaeplastida
GSVIVT01025167001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 Archaeplastida
GSVIVT01025660001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.12 Archaeplastida
GSVIVT01025662001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 Archaeplastida
GSVIVT01025665001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
GSVIVT01025671001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.1 Archaeplastida
Gb_01998 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
Gb_02823 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os02g20540.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os02g20560.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os04g39590.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os04g39600.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
MA_5195g0010 No alias Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis... 0.04 Archaeplastida
MA_59950g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g075220.1.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
Solyc07g053540.1.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g007650.3.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Solyc09g007660.1.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
Solyc11g069250.2.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Zm00001e010053_P001 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
Zm00001e020209_P002 No alias fasciclin-type arabinogalactan protein 0.15 Archaeplastida
Zm00001e024362_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e026526_P001 No alias fasciclin-type arabinogalactan protein 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 62 192
No external refs found!