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  5. LOC_Os05g51820.1

LOC_Os05g51820.1


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0003516 (SeedPlants) Phylogenetic Tree(s): OG_06_0003516_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51820.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00239460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01017892001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
MA_194157g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e014279_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e026696_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 50
No external refs found!