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  5. LOC_Os06g02530.1

LOC_Os06g02530.1


Description : no hits & (original description: none)


Gene families : OG0006390 (Archaeplastida) Phylogenetic Tree(s): OG0006390_tree ,
OG_05_0004686 (LandPlants) Phylogenetic Tree(s): OG_05_0004686_tree ,
OG_06_0004054 (SeedPlants) Phylogenetic Tree(s): OG_06_0004054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g02530.1
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00029360 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT4G28310 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.15 Archaeplastida
GSVIVT01020552001 No alias No description available 0.15 Archaeplastida
Gb_35558 No alias no hits & (original description: none) 0.14 Archaeplastida
Gb_35559 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_57579g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_65418g0010 No alias no hits & (original description: none) 0.12 Archaeplastida
MA_7129g0010 No alias no hits & (original description: none) 0.12 Archaeplastida
Mp5g00160.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Pp3c17_13330V3.1 No alias No annotation 0.05 Archaeplastida
Solyc07g053950.1.1 No alias no hits & (original description: none) 0.19 Archaeplastida
Solyc10g008320.1.1 No alias no hits & (original description: none) 0.2 Archaeplastida
Zm00001e029849_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!