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  5. LOC_Os06g03890.1

LOC_Os06g03890.1


Description : GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana (sp|q9fj45|gdl83_arath : 102.0)


Gene families : OG0000147 (Archaeplastida) Phylogenetic Tree(s): OG0000147_tree ,
OG_05_0000060 (LandPlants) Phylogenetic Tree(s): OG_05_0000060_tree ,
OG_06_0004791 (SeedPlants) Phylogenetic Tree(s): OG_06_0004791_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g03890.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00149780 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00049p00054830 evm_27.TU.AmTr_v1... GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana 0.01 Archaeplastida
LOC_Os01g11620.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g11760.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os01g46120.1 No alias GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g11970.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os06g34120.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Mp7g13650.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e014296_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e015047_P001 No alias GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e024860_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e030050_P001 No alias GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!