LOC_Os06g05130.1

Description : palmitoyl-ACP thioesterase

Gene families : OG0000593 (Archaeplastida) Phylogenetic Tree(s): OG0000593_tree ,
OG_05_0000715 (LandPlants) Phylogenetic Tree(s): OG_05_0000715_tree ,
OG_06_0001636 (SeedPlants) Phylogenetic Tree(s): OG_06_0001636_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g05130.1
Cluster	HCCA: Cluster_263

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00014890	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid chain...	0.02	Archaeplastida
AT1G08510	FATB	fatty acyl-ACP thioesterases B	0.03	Archaeplastida
GSVIVT01004951001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid chain...	0.03	Archaeplastida
GSVIVT01008574001	No alias	Palmitoyl-acyl carrier protein thioesterase,...	0.03	Archaeplastida
Gb_22110	No alias	palmitoyl-ACP thioesterase	0.03	Archaeplastida
Gb_22116	No alias	Palmitoyl-acyl carrier protein thioesterase,...	0.02	Archaeplastida
Gb_35710	No alias	palmitoyl-ACP thioesterase	0.02	Archaeplastida
Gb_35711	No alias	Palmitoyl-acyl carrier protein thioesterase,...	0.02	Archaeplastida
Mp2g25150.1	No alias	palmitoyl-ACP thioesterase. palmitoyl-ACP thioesterase (FatM)	0.02	Archaeplastida
Pp3c22_11160V3.1	No alias	fatty acyl-ACP thioesterases B	0.03	Archaeplastida
Smo444039	No alias	Oleoyl-acyl carrier protein thioesterase 1,...	0.02	Archaeplastida
Zm00001e009338_P001	No alias	palmitoyl-ACP thioesterase	0.02	Archaeplastida
Zm00001e036534_P002	No alias	palmitoyl-ACP thioesterase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016790	thiolester hydrolase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0052646	alditol phosphate metabolic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002864	Acyl-ACP_thioesterase	141	409
IPR021113	Acyl-ACP-thioesterase_N	1	130

External Links

No external refs found!

LOC_Os06g05130.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation