LOC_Os06g05380.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0001470 (SeedPlants) Phylogenetic Tree(s): OG_06_0001470_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g05380.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00181570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.01	Archaeplastida
AT1G29860	ATWRKY71, WRKY71	WRKY DNA-binding protein 71	0.06	Archaeplastida
AT1G55600	ATWRKY10, MINI3, WRKY10	WRKY DNA-binding protein 10	0.01	Archaeplastida
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.01	Archaeplastida
AT1G66600	ABO3, WRKY63, ATWRKY63	ABA overly sensitive mutant 3	0.02	Archaeplastida
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.01	Archaeplastida
AT1G69810	WRKY36, ATWRKY36	WRKY DNA-binding protein 36	0.01	Archaeplastida
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.02	Archaeplastida
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.02	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.02	Archaeplastida
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.04	Archaeplastida
AT4G31800	WRKY18, ATWRKY18	WRKY DNA-binding protein 18	0.05	Archaeplastida
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.03	Archaeplastida
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.02	Archaeplastida
AT5G24110	ATWRKY30, WRKY30	WRKY DNA-binding protein 30	0.01	Archaeplastida
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.01	Archaeplastida
AT5G64810	ATWRKY51, WRKY51	WRKY DNA-binding protein 51	0.02	Archaeplastida
GSVIVT01008046001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01011356001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.07	Archaeplastida
GSVIVT01020060001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
GSVIVT01021252001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
GSVIVT01022067001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01024624001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
GSVIVT01028129001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01030258001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
GSVIVT01032662001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01033188001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01035884001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Gb_03346	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_25118	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
Gb_25547	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g47560.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os01g74140.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os02g08440.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os04g46060.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os05g27730.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.01	Archaeplastida
LOC_Os05g49100.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os11g02480.2	No alias	transcription factor (WRKY)	0.01	Archaeplastida
MA_10434651g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_10434976g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_125146g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
MA_134559g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_212937g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_47307g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_49848g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_52928g0010	No alias	transcription factor (WRKY)	0.07	Archaeplastida
MA_6918834g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_83250g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_88437g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_892467g0010	No alias	transcription factor (WRKY)	0.05	Archaeplastida
MA_9394894g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp3g17660.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Mp5g05560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp8g10640.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Pp3c11_1840V3.1	No alias	WRKY DNA-binding protein 23	0.03	Archaeplastida
Pp3c7_24490V3.1	No alias	WRKY DNA-binding protein 57	0.04	Archaeplastida
Smo147026	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Solyc02g032950.3.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Solyc08g082110.4.1	No alias	No annotation	0.02	Archaeplastida
Solyc09g015770.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc10g007970.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e015531_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e024807_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027301_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027911_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e029092_P002	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e029445_P001	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	179	237

External Links

No external refs found!

LOC_Os06g05380.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation