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  5. LOC_Os06g07210.1

LOC_Os06g07210.1


Description : large subunit of ribonucleoside-diphosphate reductase heterodimer


Gene families : OG0002474 (Archaeplastida) Phylogenetic Tree(s): OG0002474_tree ,
OG_05_0003602 (LandPlants) Phylogenetic Tree(s): OG_05_0003602_tree ,
OG_06_0004810 (SeedPlants) Phylogenetic Tree(s): OG_06_0004810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g07210.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00125090 evm_27.TU.AmTr_v1... Ribonucleoside-diphosphate reductase large subunit... 0.08 Archaeplastida
AMTR_s00017p00232600 evm_27.TU.AmTr_v1... Nucleotide metabolism.deoxynucleotide... 0.09 Archaeplastida
AT2G21790 CLS8, RNR1, ATRNR1, R1 ribonucleotide reductase 1 0.09 Archaeplastida
Cpa|evm.model.tig00001042.1 No alias Ribonucleoside-diphosphate reductase large subunit... 0.04 Archaeplastida
Cre12.g492950 No alias Nucleotide metabolism.deoxynucleotide... 0.07 Archaeplastida
GSVIVT01022278001 No alias Nucleotide metabolism.deoxynucleotide... 0.03 Archaeplastida
Gb_15263 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.17... 0.07 Archaeplastida
Gb_21933 No alias large subunit of ribonucleoside-diphosphate reductase heterodimer 0.03 Archaeplastida
MA_10435382g0010 No alias large subunit of ribonucleoside-diphosphate reductase heterodimer 0.09 Archaeplastida
MA_158556g0010 No alias large subunit of ribonucleoside-diphosphate reductase heterodimer 0.06 Archaeplastida
Mp2g00850.1 No alias large subunit of ribonucleoside-diphosphate reductase heterodimer 0.1 Archaeplastida
Pp3c6_14810V3.1 No alias ribonucleotide reductase 1 0.08 Archaeplastida
Solyc04g012060.3.1 No alias large subunit of ribonucleoside-diphosphate reductase heterodimer 0.05 Archaeplastida
Solyc04g051350.3.1 No alias large subunit of ribonucleoside-diphosphate reductase heterodimer 0.1 Archaeplastida
Zm00001e030111_P001 No alias large subunit of ribonucleoside-diphosphate reductase heterodimer 0.06 Archaeplastida
Zm00001e036393_P001 No alias large subunit of ribonucleoside-diphosphate reductase heterodimer 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
CC GO:0042555 MCM complex IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051095 regulation of helicase activity IEP Neighborhood
BP GO:0051097 negative regulation of helicase activity IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:1905462 regulation of DNA duplex unwinding IEP Neighborhood
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Neighborhood
BP GO:1905774 regulation of DNA helicase activity IEP Neighborhood
BP GO:1905775 negative regulation of DNA helicase activity IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000788 RNR_lg_C 216 757
IPR005144 ATP-cone_dom 1 89
IPR013509 RNR_lsu_N 142 212
No external refs found!