1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g08850.1

LOC_Os06g08850.1


Description : cyclic nucleotide-gated cation channel (CNGC)


Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0000296 (LandPlants) Phylogenetic Tree(s): OG_05_0000296_tree ,
OG_06_0001368 (SeedPlants) Phylogenetic Tree(s): OG_06_0001368_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g08850.1
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00015490 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.05 Archaeplastida
AMTR_s00210p00019190 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
AT1G15990 CNGC7, ATCNGC7 cyclic nucleotide gated channel 7 0.03 Archaeplastida
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.04 Archaeplastida
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.04 Archaeplastida
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.05 Archaeplastida
AT5G57940 CNGC5, ATCNGC5 cyclic nucleotide gated channel 5 0.03 Archaeplastida
Cre01.g053700 No alias Potassium channel SKOR OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01023608001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
GSVIVT01027087001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.05 Archaeplastida
GSVIVT01028711001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
GSVIVT01029404001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.06 Archaeplastida
GSVIVT01029407001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
Gb_31243 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Gb_31623 No alias cyclic nucleotide-gated cation channel (CNGC) 0.06 Archaeplastida
Gb_32552 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida
LOC_Os02g41710.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
LOC_Os02g54760.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
LOC_Os06g33570.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
MA_10428782g0010 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
MA_10437079g0010 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
MA_446575g0010 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Mp4g04110.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Mp5g07780.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Mp6g01920.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Pp3c13_22730V3.1 No alias cyclic nucleotide gated channel 5 0.02 Archaeplastida
Pp3c17_22030V3.1 No alias cyclic nucleotide gated channel 9 0.06 Archaeplastida
Pp3c2_11890V3.1 No alias cyclic nucleotide gated channel 9 0.02 Archaeplastida
Pp3c3_20390V3.1 No alias cyclic nucleotide-binding transporter 1 0.03 Archaeplastida
Smo113786 No alias Solute transport.channels.VIC superfamily.cyclic... 0.05 Archaeplastida
Smo266514 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
Smo266723 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
Solyc03g007260.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.01 Archaeplastida
Solyc03g098210.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.06 Archaeplastida
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc07g005590.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.09 Archaeplastida
Solyc07g006510.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.08 Archaeplastida
Solyc08g069140.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc12g010010.2.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.09 Archaeplastida
Zm00001e006772_P003 No alias cyclic nucleotide-gated cation channel (CNGC) 0.09 Archaeplastida
Zm00001e011591_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Zm00001e015160_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.01 Archaeplastida
Zm00001e016004_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Zm00001e016088_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Zm00001e030701_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.1 Archaeplastida
Zm00001e034885_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.12 Archaeplastida
Zm00001e036286_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 76 400
No external refs found!