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  5. LOC_Os06g08880.1

LOC_Os06g08880.1


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0081549 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0070435 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g08880.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g09090.1 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_101552g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10430853g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_6222576g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 5 313
No external refs found!