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  5. LOC_Os06g10580.1

LOC_Os06g10580.1


Description : cyclic nucleotide-gated cation channel (CNGC)


Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0002629 (LandPlants) Phylogenetic Tree(s): OG_05_0002629_tree ,
OG_06_0001915 (SeedPlants) Phylogenetic Tree(s): OG_06_0001915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g10580.1
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00152360 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.06 Archaeplastida
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.05 Archaeplastida
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.05 Archaeplastida
Cpa|evm.model.tig00000851.5 No alias Putative cyclic nucleotide-gated ion channel 8... 0.01 Archaeplastida
GSVIVT01015970001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
GSVIVT01025208001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
GSVIVT01027087001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
GSVIVT01028711001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.08 Archaeplastida
GSVIVT01029404001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.05 Archaeplastida
GSVIVT01029407001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
LOC_Os06g33570.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
MA_602116g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp6g01920.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Pp3c13_22730V3.1 No alias cyclic nucleotide gated channel 5 0.03 Archaeplastida
Pp3c17_22030V3.1 No alias cyclic nucleotide gated channel 9 0.02 Archaeplastida
Pp3c3_20390V3.1 No alias cyclic nucleotide-binding transporter 1 0.02 Archaeplastida
Solyc03g098210.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Solyc05g050360.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Solyc05g050380.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Solyc07g005590.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Solyc12g010010.2.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 176 495
No external refs found!