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  5. LOC_Os06g10990.1

LOC_Os06g10990.1


Description : Luminal-binding protein 4 OS=Nicotiana tabacum (sp|q03684|bip4_tobac : 227.0)


Gene families : OG0000216 (Archaeplastida) Phylogenetic Tree(s): OG0000216_tree ,
OG_05_0012191 (LandPlants) Phylogenetic Tree(s): OG_05_0012191_tree ,
OG_06_0012292 (SeedPlants) Phylogenetic Tree(s): OG_06_0012292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g10990.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00199970 evm_27.TU.AmTr_v1... Luminal-binding protein OS=Solanum lycopersicum 0.02 Archaeplastida
Gb_10326 No alias chaperone (Hsp70) 0.02 Archaeplastida
Gb_12488 No alias Probable mediator of RNA polymerase II transcription... 0.04 Archaeplastida
LOC_Os05g30480.1 No alias Heat shock 70 kDa protein BIP3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10436544g0020 No alias Heat shock cognate 70 kDa protein OS=Petunia hybrida... 0.02 Archaeplastida
MA_160636g0010 No alias Probable mediator of RNA polymerase II transcription... 0.03 Archaeplastida
Pp3c3_25750V3.1 No alias Heat shock protein 70 (Hsp 70) family protein 0.02 Archaeplastida
Solyc04g011450.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g076020.3.1 No alias chaperone (Hsp70) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 67 447
No external refs found!