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  5. LOC_Os06g12460.1

LOC_Os06g12460.1


Description : mannan synthase (CSLA)


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000992 (LandPlants) Phylogenetic Tree(s): OG_05_0000992_tree ,
OG_06_0000659 (SeedPlants) Phylogenetic Tree(s): OG_06_0000659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12460.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT1G24070 CSLA10, ATCSLA10 cellulose synthase-like A10 0.05 Archaeplastida
AT4G13410 ATCSLA15, CSLA15 Nucleotide-diphospho-sugar transferases superfamily protein 0.05 Archaeplastida
AT4G16590 ATCSLA1, ATCSLA01, CSLA01 cellulose synthase-like A01 0.02 Archaeplastida
Gb_35783 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
MA_10426467g0020 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.01 Archaeplastida
MA_10432355g0010 No alias Probable xyloglucan glycosyltransferase 3 OS=Oryza... 0.01 Archaeplastida
MA_712121g0010 No alias Probable xyloglucan glycosyltransferase 9 OS=Oryza... 0.01 Archaeplastida
Pp3c17_19670V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.01 Archaeplastida
Pp3c22_1440V3.1 No alias Cellulose-synthase-like C5 0.03 Archaeplastida
Smo442658 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.01 Archaeplastida
Solyc06g074630.4.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Zm00001e011947_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Zm00001e022456_P001 No alias mannan synthase (CSLA) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 268 459
No external refs found!