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  5. LOC_Os06g14420.1

LOC_Os06g14420.1


Description : Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana (sp|q8vy81|nud21_arath : 148.0)


Gene families : OG0000739 (Archaeplastida) Phylogenetic Tree(s): OG0000739_tree ,
OG_05_0000536 (LandPlants) Phylogenetic Tree(s): OG_05_0000536_tree ,
OG_06_0000345 (SeedPlants) Phylogenetic Tree(s): OG_06_0000345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g14420.1
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00238370 evm_27.TU.AmTr_v1... Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00060p00096990 evm_27.TU.AmTr_v1... Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G18300 NUDT4, atnudt4 nudix hydrolase homolog 4 0.11 Archaeplastida
AT1G73540 atnudt21, NUDT21 nudix hydrolase homolog 21 0.09 Archaeplastida
GSVIVT01008469001 No alias Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana 0.11 Archaeplastida
GSVIVT01011668001 No alias Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01030687001 No alias Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os02g50130.1 No alias Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.07 Archaeplastida
Solyc01g005390.3.1 No alias Nudix hydrolase 18, mitochondrial OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g118470.4.1 No alias Nudix hydrolase 17, mitochondrial OS=Arabidopsis... 0.16 Archaeplastida
Solyc06g068900.4.1 No alias Nudix hydrolase 17, mitochondrial OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e015741_P001 No alias Nudix hydrolase 18, mitochondrial OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e022570_P001 No alias Nudix hydrolase 12, mitochondrial OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e036756_P001 No alias Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e040796_P001 No alias Nudix hydrolase 13, mitochondrial OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 25 155
No external refs found!