LOC_Os06g15020.1

Description : 3-ketoacyl-CoA synthase (KCS)

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0021034 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020236 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g15020.1
Cluster	HCCA: Cluster_185

Target	Alias	Description	ECC score	Gene Family Method
Gb_17018	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g12030.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_10426663g0020	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
MA_10429708g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
MA_10433600g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_11217g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
MA_415118g0020	No alias	3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_43136g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
MA_759169g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_76149g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
MA_91011g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Mp1g06080.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Mp2g20220.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Mp2g20240.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Pp3c1_26250V3.1	No alias	3-ketoacyl-CoA synthase 11	0.03	Archaeplastida
Pp3c8_1690V3.1	No alias	3-ketoacyl-CoA synthase 11	0.02	Archaeplastida
Pp3c8_6790V3.1	No alias	3-ketoacyl-CoA synthase 4	0.03	Archaeplastida
Smo231244	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
Smo79947	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
Solyc02g063140.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc02g085870.3.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc03g078330.1.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc05g009270.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc05g009280.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc06g053870.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc09g083050.3.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc11g072990.1.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e002667_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0043631	RNA polyadenylation	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0070566	adenylyltransferase activity	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	381	462
IPR013601	FAE1_typ3_polyketide_synth	76	364

External Links

No external refs found!

LOC_Os06g15020.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation