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  5. LOC_Os06g16080.1

LOC_Os06g16080.1


Description : no hits & (original description: none)


Gene families : OG0000817 (Archaeplastida) Phylogenetic Tree(s): OG0000817_tree ,
OG_05_0000485 (LandPlants) Phylogenetic Tree(s): OG_05_0000485_tree ,
OG_06_0000231 (SeedPlants) Phylogenetic Tree(s): OG_06_0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g16080.1
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g27660.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g46100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g05570.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os03g27700.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g02960.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
LOC_Os04g08804.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g08812.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g16120.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g21370.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g29080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g08180.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os10g10020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g25960.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28140.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g47445.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g13020.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g26120.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os12g27230.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g31050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g35830.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g37190.1 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!