LOC_Os06g16200.1


Description : Protein trichome birefringence-like 20 OS=Arabidopsis thaliana (sp|q9m896|tbl20_arath : 333.0)


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0000825 (LandPlants) Phylogenetic Tree(s): OG_05_0000825_tree ,
OG_06_0001537 (SeedPlants) Phylogenetic Tree(s): OG_06_0001537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g16200.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266030 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00006p00266300 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G01430 TBL25 TRICHOME BIREFRINGENCE-LIKE 25 0.04 Archaeplastida
AT3G28150 TBL22 TRICHOME BIREFRINGENCE-LIKE 22 0.02 Archaeplastida
AT4G01080 TBL26 TRICHOME BIREFRINGENCE-LIKE 26 0.03 Archaeplastida
AT4G23790 TBL24 TRICHOME BIREFRINGENCE-LIKE 24 0.03 Archaeplastida
AT4G25360 TBL18 TRICHOME BIREFRINGENCE-LIKE 18 0.03 Archaeplastida
GSVIVT01018511001 No alias Protein trichome birefringence-like 18 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032519001 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01036469001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g12860.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g16250.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
MA_245850g0010 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida
Mp1g28350.1 No alias Protein YLS7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp8g08270.1 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida
Pp3c16_10090V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.05 Archaeplastida
Pp3c2_37020V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Smo404468 No alias Protein trichome birefringence-like 23 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo418889 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g008050.4.1 No alias xyloglucan O-acetyltransferase (AXY4) 0.04 Archaeplastida
Solyc02g087120.4.1 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g089700.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.05 Archaeplastida
Solyc08g082060.3.1 No alias mannan O-acetyltransferase (MOAT) 0.02 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e020949_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e030880_P002 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e036802_P001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.11 Archaeplastida
Zm00001e037065_P002 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 137 426
IPR025846 PMR5_N_dom 78 136
No external refs found!