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  5. AMTR_s00007p00179930

AMTR_s00007p00179930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.142

Description : Carbohydrate metabolism.fermentation.alcoholic fermentation.pyruvate decarboxylase


Gene families : OG0000714 (Archaeplastida) Phylogenetic Tree(s): OG0000714_tree ,
OG_05_0000807 (LandPlants) Phylogenetic Tree(s): OG_05_0000807_tree ,
OG_06_0001250 (SeedPlants) Phylogenetic Tree(s): OG_06_0001250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00179930
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT5G01330 PDC3 pyruvate decarboxylase-3 0.03 Archaeplastida
Cpa|evm.model.tig00020614.45 No alias Pyruvate decarboxylase 2 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
GSVIVT01024702001 No alias Carbohydrate metabolism.fermentation.alcoholic... 0.03 Archaeplastida
Gb_08493 No alias Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon... 0.02 Archaeplastida
Gb_08494 No alias Pyruvate decarboxylase 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_12301 No alias pyruvate decarboxylase 0.02 Archaeplastida
Gb_33735 No alias pyruvate decarboxylase 0.02 Archaeplastida
Gb_36228 No alias Pyruvate decarboxylase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_36229 No alias Pyruvate decarboxylase 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_12415g0010 No alias Pyruvate decarboxylase 2 (Fragment) OS=Pisum sativum... 0.02 Archaeplastida
Mp3g21090.1 No alias pyruvate decarboxylase 0.03 Archaeplastida
Pp3c1_22470V3.1 No alias pyruvate decarboxylase-2 0.03 Archaeplastida
Smo157772 No alias Carbohydrate metabolism.fermentation.alcoholic... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000015 phosphopyruvate hydratase complex IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004634 phosphopyruvate hydratase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 44 210
IPR011766 TPP_enzyme-bd_C 451 575
IPR012000 Thiamin_PyroP_enz_cen_dom 241 348
No external refs found!