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  5. LOC_Os06g28000.1

LOC_Os06g28000.1


Description : no hits & (original description: none)


Gene families : OG0000377 (Archaeplastida) Phylogenetic Tree(s): OG0000377_tree ,
OG_05_0000243 (LandPlants) Phylogenetic Tree(s): OG_05_0000243_tree ,
OG_06_0002466 (SeedPlants) Phylogenetic Tree(s): OG_06_0002466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g28000.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00062100 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00085p00068720 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00085p00068770 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00120p00051630 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AT1G10750 No alias Protein of Unknown Function (DUF239) 0.06 Archaeplastida
AT1G23340 No alias Protein of Unknown Function (DUF239) 0.02 Archaeplastida
AT1G70550 No alias Protein of Unknown Function (DUF239) 0.03 Archaeplastida
AT5G18460 No alias Protein of Unknown Function (DUF239) 0.05 Archaeplastida
AT5G50150 No alias Protein of Unknown Function (DUF239) 0.02 Archaeplastida
GSVIVT01007693001 No alias No description available 0.04 Archaeplastida
GSVIVT01011532001 No alias No description available 0.02 Archaeplastida
GSVIVT01026339001 No alias No description available 0.05 Archaeplastida
GSVIVT01035338001 No alias No description available 0.04 Archaeplastida
Gb_08416 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_36043 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g07764.2 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g45170.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_109497g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_1134g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_168064g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7933g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c16_8870V3.1 No alias Protein of Unknown Function (DUF239) 0.04 Archaeplastida
Pp3c6_29500V3.1 No alias Protein of Unknown Function (DUF239) 0.03 Archaeplastida
Smo80985 No alias No description available 0.02 Archaeplastida
Smo90379 No alias No description available 0.02 Archaeplastida
Solyc01g005550.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g081570.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g050490.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g005010.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g071590.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g070080.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g070090.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e003850_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006081_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016772_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020747_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e033077_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e037003_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR004314 Neprosin 206 427
IPR025521 Neprosin_propep 75 192
No external refs found!