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  5. LOC_Os06g40090.1

LOC_Os06g40090.1


Description : no hits & (original description: none)


Gene families : OG0001049 (Archaeplastida) Phylogenetic Tree(s): OG0001049_tree ,
OG_05_0000638 (LandPlants) Phylogenetic Tree(s): OG_05_0000638_tree ,
OG_06_0000521 (SeedPlants) Phylogenetic Tree(s): OG_06_0000521_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g40090.1
Cluster HCCA: Cluster_364

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00151900 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00030p00143350 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G21326 No alias VQ motif-containing protein 0.05 Archaeplastida
AT1G68450 No alias VQ motif-containing protein 0.03 Archaeplastida
AT3G18690 MKS1 MAP kinase substrate 1 0.03 Archaeplastida
Gb_01280 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_04497 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22052 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g33600.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_370498g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6029g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_63904g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_838428g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_87081g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c10_7810V3.1 No alias No annotation 0.03 Archaeplastida
Smo409496 No alias No description available 0.04 Archaeplastida
Smo447774 No alias No description available 0.03 Archaeplastida
Solyc11g005720.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e011491_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e037399_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
InterPro domains Description Start Stop
IPR008889 VQ 40 65
No external refs found!