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  5. LOC_Os06g40550.1

LOC_Os06g40550.1


Description : sporopollenin precursor exporter. subfamily ABCG transporter


Gene families : OG0000388 (Archaeplastida) Phylogenetic Tree(s): OG0000388_tree ,
OG_05_0006265 (LandPlants) Phylogenetic Tree(s): OG_05_0006265_tree ,
OG_06_0007820 (SeedPlants) Phylogenetic Tree(s): OG_06_0007820_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g40550.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00030p00144980 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00057p00214480 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00061p00187570 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.08 Archaeplastida
AT1G31770 ABCG14 ATP-binding cassette 14 0.03 Archaeplastida
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.13 Archaeplastida
GSVIVT01001660001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01014733001 No alias Solute transport.primary active transport.ABC... 0.1 Archaeplastida
Gb_00289 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.03 Archaeplastida
MA_16472g0010 No alias ABC transporter G family member 26 OS=Arabidopsis... 0.06 Archaeplastida
MA_81274g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp4g22510.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Mp6g05900.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Pp3c11_25800V3.1 No alias ABC-2 type transporter family protein 0.05 Archaeplastida
Pp3c17_18730V3.1 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
Solyc04g006960.3.1 No alias cytokinin transporter (ABCG14). subfamily ABCG transporter 0.03 Archaeplastida
Solyc07g065780.2.1 No alias ABC transporter G family member 26 OS=Arabidopsis... 0.16 Archaeplastida
Solyc12g013630.1.1 No alias subfamily ABCG transporter 0.15 Archaeplastida
Zm00001e037432_P001 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.16 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 417 626
IPR003439 ABC_transporter-like 92 242
No external refs found!