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  5. LOC_Os06g41380.1

LOC_Os06g41380.1


Description : Kleisin-like bridging component NSE4 of homologous recombination repair Smc5-Smc6 complex


Gene families : OG0002364 (Archaeplastida) Phylogenetic Tree(s): OG0002364_tree ,
OG_05_0002129 (LandPlants) Phylogenetic Tree(s): OG_05_0002129_tree ,
OG_06_0003194 (SeedPlants) Phylogenetic Tree(s): OG_06_0003194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g41380.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT3G20760 No alias Nse4, component of Smc5/6 DNA repair complex 0.03 Archaeplastida
Cpa|evm.model.tig00000217.26 No alias DNA damage response.DNA repair mechanisms.homologous... 0.01 Archaeplastida
LOC_Os08g40010.1 No alias Kleisin-like bridging component NSE4 of homologous... 0.03 Archaeplastida
Zm00001e030510_P001 No alias Kleisin-like bridging component NSE4 of homologous... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0042575 DNA polymerase complex IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
CC GO:0043625 delta DNA polymerase complex IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
InterPro domains Description Start Stop
IPR014854 Nse4_C 215 303
No external refs found!