1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g43900.1

LOC_Os06g43900.1


Description : component psRPL35 of large ribosomal subunit proteome


Gene families : OG0006995 (Archaeplastida) Phylogenetic Tree(s): OG0006995_tree ,
OG_05_0007071 (LandPlants) Phylogenetic Tree(s): OG_05_0007071_tree ,
OG_06_0008475 (SeedPlants) Phylogenetic Tree(s): OG_06_0008475_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g43900.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00070230 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 Archaeplastida
AT2G24090 No alias Ribosomal protein L35 0.22 Archaeplastida
Cre04.g217932 No alias Protein biosynthesis.organelle translation... 0.14 Archaeplastida
GSVIVT01012561001 No alias Protein biosynthesis.organelle translation... 0.01 Archaeplastida
GSVIVT01012574001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Gb_16123 No alias component psRPL35 of large ribosomal subunit proteome 0.09 Archaeplastida
MA_181338g0010 No alias component psRPL35 of large ribosomal subunit proteome 0.06 Archaeplastida
Mp5g05850.1 No alias component psRPL35 of large ribosomal subunit proteome 0.23 Archaeplastida
Pp3c21_8680V3.1 No alias Ribosomal protein L35 0.03 Archaeplastida
Pp3c22_13420V3.1 No alias Ribosomal protein L35 0.18 Archaeplastida
Smo444022 No alias Protein biosynthesis.organelle translation... 0.07 Archaeplastida
Solyc07g006000.3.1 No alias component psRPL35 of large ribosomal subunit proteome 0.14 Archaeplastida
Zm00001e037448_P001 No alias component psRPL35 of large ribosomal subunit proteome 0.28 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021137 Ribosomal_L35 76 133
No external refs found!