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  5. LOC_Os06g46030.1

LOC_Os06g46030.1


Description : Protein G1-like2 OS=Oryza sativa subsp. indica (sp|a2yg32|g1l2_orysi : 296.0)


Gene families : OG0000579 (Archaeplastida) Phylogenetic Tree(s): OG0000579_tree ,
OG_05_0000324 (LandPlants) Phylogenetic Tree(s): OG_05_0000324_tree ,
OG_06_0000239 (SeedPlants) Phylogenetic Tree(s): OG_06_0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g46030.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00052610 evm_27.TU.AmTr_v1... Protein G1-like2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00153p00047660 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... 0.02 Archaeplastida
AMTR_s00155p00022580 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 Archaeplastida
AT1G78815 LSH7 Protein of unknown function (DUF640) 0.02 Archaeplastida
AT2G42610 LSH10 Protein of unknown function (DUF640) 0.04 Archaeplastida
AT3G04510 LSH2 Protein of unknown function (DUF640) 0.05 Archaeplastida
AT3G23290 LSH4 No description available 0.04 Archaeplastida
AT5G28490 LSH1 Protein of unknown function (DUF640) 0.06 Archaeplastida
GSVIVT01020708001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.05 Archaeplastida
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.03 Archaeplastida
LOC_Os02g07030.1 No alias Protein G1-like1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os05g28040.1 No alias Protein G1-like9 OS=Oryza sativa subsp. indica... 0.04 Archaeplastida
LOC_Os10g33780.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 Archaeplastida
Mp2g00330.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 Archaeplastida
Solyc07g062470.4.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 Archaeplastida
Solyc07g150147.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
Solyc12g014260.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 Archaeplastida
Zm00001e013711_P001 No alias Protein G1-like2 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Zm00001e023022_P001 No alias Protein G1-like3 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Zm00001e023639_P001 No alias Protein G1-like6 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
Zm00001e027283_P001 No alias Protein G1-like8 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e032784_P001 No alias Protein G1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e037775_P001 No alias Protein G1-like2 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006936 ALOG_dom 18 135
No external refs found!