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  5. LOC_Os06g47310.1

LOC_Os06g47310.1


Description : Protein IRX15-LIKE OS=Arabidopsis thaliana (sp|q9fh92|ix15l_arath : 233.0)


Gene families : OG0000727 (Archaeplastida) Phylogenetic Tree(s): OG0000727_tree ,
OG_05_0000525 (LandPlants) Phylogenetic Tree(s): OG_05_0000525_tree ,
OG_06_0003000 (SeedPlants) Phylogenetic Tree(s): OG_06_0003000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g47310.1
Cluster HCCA: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00174150 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.02 Archaeplastida
AMTR_s00051p00191940 evm_27.TU.AmTr_v1... Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00099p00012720 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.03 Archaeplastida
AT1G09610 No alias Protein of unknown function (DUF579) 0.04 Archaeplastida
AT1G33800 No alias Protein of unknown function (DUF579) 0.03 Archaeplastida
AT1G71690 No alias Protein of unknown function (DUF579) 0.04 Archaeplastida
AT2G15440 No alias Protein of unknown function (DUF579) 0.04 Archaeplastida
AT3G50220 No alias Protein of unknown function (DUF579) 0.04 Archaeplastida
AT5G67210 No alias Protein of unknown function (DUF579) 0.04 Archaeplastida
GSVIVT01004862001 No alias Cell wall.hemicellulose.xylan.modification and... 0.05 Archaeplastida
GSVIVT01023202001 No alias No description available 0.03 Archaeplastida
GSVIVT01023221001 No alias Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.02 Archaeplastida
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.04 Archaeplastida
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os04g55640.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g13870.1 No alias Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.04 Archaeplastida
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.02 Archaeplastida
MA_18698g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.03 Archaeplastida
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.03 Archaeplastida
MA_58340g0010 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g103360.4.1 No alias glucuronoxylan 4-O-methyltransferase 0.05 Archaeplastida
Solyc02g064945.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc02g093090.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g110890.1.1 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g015497.1.1 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.05 Archaeplastida
Solyc11g031950.1.1 No alias glucuronoxylan 4-O-methyltransferase 0.06 Archaeplastida
Zm00001e006478_P001 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e006744_P001 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e011047_P001 No alias Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e013082_P001 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e013688_P001 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e018367_P001 No alias glucuronoxylan 4-O-methyltransferase 0.02 Archaeplastida
Zm00001e039770_P002 No alias glucuronoxylan 4-O-methyltransferase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 123 311
No external refs found!