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  5. AMTR_s00007p00258170

AMTR_s00007p00258170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.310

Description : Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase


Gene families : OG0000616 (Archaeplastida) Phylogenetic Tree(s): OG0000616_tree ,
OG_05_0000491 (LandPlants) Phylogenetic Tree(s): OG_05_0000491_tree ,
OG_06_0000335 (SeedPlants) Phylogenetic Tree(s): OG_06_0000335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00258170
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT3G28340 GATL10 galacturonosyltransferase-like 10 0.05 Archaeplastida
GSVIVT01009639001 No alias Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.04 Archaeplastida
GSVIVT01011066001 No alias Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01011949001 No alias Probable galacturonosyltransferase-like 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032581001 No alias Probable galacturonosyltransferase-like 8 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_30431 No alias galacturonosyltransferase 0.07 Archaeplastida
Gb_37205 No alias galacturonosyltransferase 0.06 Archaeplastida
LOC_Os02g50600.1 No alias galacturonosyltransferase 0.12 Archaeplastida
LOC_Os03g47530.1 No alias galacturonosyltransferase 0.04 Archaeplastida
LOC_Os04g44850.1 No alias galacturonosyltransferase 0.04 Archaeplastida
MA_10429227g0010 No alias Probable galacturonosyltransferase-like 4 OS=Arabidopsis... 0.02 Archaeplastida
MA_10432403g0010 No alias galacturonosyltransferase 0.04 Archaeplastida
MA_766299g0010 No alias galacturonosyltransferase 0.03 Archaeplastida
Mp2g19350.1 No alias galacturonosyltransferase 0.04 Archaeplastida
Pp3c16_25090V3.1 No alias glucosyl transferase family 8 0.05 Archaeplastida
Solyc02g087350.3.1 No alias galacturonosyltransferase 0.11 Archaeplastida
Solyc09g074080.3.1 No alias galacturonosyltransferase 0.03 Archaeplastida
Zm00001e001382_P001 No alias galacturonosyltransferase 0.02 Archaeplastida
Zm00001e001733_P001 No alias galacturonosyltransferase 0.02 Archaeplastida
Zm00001e007430_P001 No alias galacturonosyltransferase 0.04 Archaeplastida
Zm00001e015772_P001 No alias galacturonosyltransferase 0.05 Archaeplastida
Zm00001e036043_P001 No alias galacturonosyltransferase 0.07 Archaeplastida
Zm00001e038370_P001 No alias galacturonosyltransferase 0.02 Archaeplastida
Zm00001e041300_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 81 339
No external refs found!