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  5. AMTR_s00007p00258390

AMTR_s00007p00258390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.311

Description : Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum


Gene families : OG0006464 (Archaeplastida) Phylogenetic Tree(s): OG0006464_tree ,
OG_05_0004447 (LandPlants) Phylogenetic Tree(s): OG_05_0004447_tree ,
OG_06_0008009 (SeedPlants) Phylogenetic Tree(s): OG_06_0008009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00258390
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Gb_04574 No alias Pleiotropic drug resistance protein 3 OS=Nicotiana... 0.08 Archaeplastida
MA_468943g0010 No alias Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.04 Archaeplastida
MA_58149g0010 No alias ABC transporter G family member 35 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!