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  5. LOC_Os06g49000.1

LOC_Os06g49000.1


Description : no hits & (original description: none)


Gene families : OG0000524 (Archaeplastida) Phylogenetic Tree(s): OG0000524_tree ,
OG_05_0000286 (LandPlants) Phylogenetic Tree(s): OG_05_0000286_tree ,
OG_06_0025446 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g49000.1
Cluster HCCA: Cluster_326

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014456001 No alias No description available 0.02 Archaeplastida
Gb_26934 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g01840.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g09570.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g42080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e024441_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036718_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR025315 DUF4220 55 396
IPR007658 DUF594 736 789
No external refs found!