LOC_Os06g51029.1

Description : component FtsH1|2|5|6|8 of FtsH plastidial protease complexes

Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0006013 (LandPlants) Phylogenetic Tree(s): OG_05_0006013_tree ,
OG_06_0009034 (SeedPlants) Phylogenetic Tree(s): OG_06_0009034_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g51029.1
Cluster	HCCA: Cluster_324

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00232760	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.metallopeptidase...	0.04	Archaeplastida
AMTR_s00056p00047160	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
AMTR_s00106p00108310	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.metallopeptidase...	0.04	Archaeplastida
AT1G50250	FTSH1	FTSH protease 1	0.04	Archaeplastida
AT5G42270	FTSH5, VAR1	FtsH extracellular protease family	0.03	Archaeplastida
Cpa\|evm.model.tig00000704.23	No alias	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.02	Archaeplastida
Cre09.g393950	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.03	Archaeplastida
Cre12.g485800	No alias	Protein degradation.peptidase families.metallopeptidase...	0.03	Archaeplastida
Cre17.g720050	No alias	Protein degradation.peptidase families.metallopeptidase...	0.05	Archaeplastida
GSVIVT01008686001	No alias	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.07	Archaeplastida
GSVIVT01020760001	No alias	Protein degradation.peptidase families.metallopeptidase...	0.08	Archaeplastida
Gb_06887	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.04	Archaeplastida
Gb_12830	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.05	Archaeplastida
MA_188257g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_98203g0010	No alias	No annotation	0.08	Archaeplastida
Mp4g19200.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.04	Archaeplastida
Mp6g15080.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.02	Archaeplastida
Pp3c12_22830V3.1	No alias	FtsH extracellular protease family	0.08	Archaeplastida
Pp3c20_15780V3.1	No alias	FtsH extracellular protease family	0.07	Archaeplastida
Pp3c20_5760V3.1	No alias	FtsH extracellular protease family	0.03	Archaeplastida
Pp3c22_8480V3.1	No alias	FtsH extracellular protease family	0.02	Archaeplastida
Pp3c23_14665V3.1	No alias	FtsH extracellular protease family	0.04	Archaeplastida
Pp3c23_8400V3.1	No alias	FtsH extracellular protease family	0.08	Archaeplastida
Smo149856	No alias	Protein degradation.peptidase families.metallopeptidase...	0.02	Archaeplastida
Smo152929	No alias	Protein degradation.peptidase families.metallopeptidase...	0.03	Archaeplastida
Smo98591	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
Solyc03g046340.3.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.03	Archaeplastida
Solyc04g082250.3.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.03	Archaeplastida
Solyc07g055320.4.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.08	Archaeplastida
Zm00001e030153_P001	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.09	Archaeplastida
Zm00001e030358_P003	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.14	Archaeplastida
Zm00001e037753_P001	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.13	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004096	catalase activity	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0032977	membrane insertase activity	IEP	Neighborhood
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0071949	FAD binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	269	400
IPR000642	Peptidase_M41	482	675

External Links

No external refs found!

LOC_Os06g51029.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation