LOC_Os07g04050.1


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0078475 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0067259 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g04050.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00141p00103540 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G29980 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT2G41800 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT2G41810 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT3G08030 No alias Protein of unknown function, DUF642 0.02 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
LOC_Os01g42520.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g41740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10082318g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_201516g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_4501g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6019571g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_655783g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_770477g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9589g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g087540.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g070540.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g120040.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc04g015610.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc08g067030.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g042930.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006089_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007711_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007713_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007714_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e013973_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041141_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!