LOC_Os07g04560.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0004181 (SeedPlants) Phylogenetic Tree(s): OG_06_0004181_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g04560.1
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00260100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00017p00255350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.02	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.02	Archaeplastida
AT2G33480	NAC041, ANAC041	NAC domain containing protein 41	0.03	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.02	Archaeplastida
AT3G10480	ANAC050, NAC050	NAC domain containing protein 50	0.03	Archaeplastida
AT3G15500	ATNAC3, ANAC055,...	NAC domain containing protein 3	0.03	Archaeplastida
AT3G15510	NARS1, NAC2,...	NAC domain containing protein 2	0.03	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.03	Archaeplastida
AT5G62380	NAC101, VND6, ANAC101	NAC-domain protein 101	0.04	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01023921001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01033372001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Gb_12203	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_37440	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_37720	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_41742	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os01g29840.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g36880.2	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os03g21060.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
LOC_Os03g42630.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g56580.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os04g38720.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os06g51070.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_10426531g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10431189g0020	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_122815g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_139896g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_1948g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_665641g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp6g02670.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c16_23260V3.1	No alias	NAC domain containing protein 35	0.03	Archaeplastida
Solyc02g069960.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc05g021090.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007603_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e008026_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e014291_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029194_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e030150_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e037088_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Neighborhood
MF	GO:0004834	tryptophan synthase activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006568	tryptophan metabolic process	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006586	indolalkylamine metabolic process	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
BP	GO:0042430	indole-containing compound metabolic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	33	162

External Links

No external refs found!

LOC_Os07g04560.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation