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  5. LOC_Os07g05940.1

LOC_Os07g05940.1


Description : neoxanthin cleavage protein


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0001191 (LandPlants) Phylogenetic Tree(s): OG_05_0001191_tree ,
OG_06_0001076 (SeedPlants) Phylogenetic Tree(s): OG_06_0001076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g05940.1
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.05 Archaeplastida
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.04 Archaeplastida
GSVIVT01032110001 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
GSVIVT01038080001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.07 Archaeplastida
Gb_04986 No alias carotenoid cleavage dioxygenase (CCD4) 0.07 Archaeplastida
Gb_40118 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 Archaeplastida
MA_10428396g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.05 Archaeplastida
MA_210464g0010 No alias No annotation 0.03 Archaeplastida
MA_906445g0010 No alias No annotation 0.01 Archaeplastida
Solyc01g087250.3.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.04 Archaeplastida
Solyc01g087260.4.1 No alias No annotation 0.03 Archaeplastida
Solyc07g056570.1.1 No alias neoxanthin cleavage protein 0.05 Archaeplastida
Solyc08g016720.1.1 No alias neoxanthin cleavage protein 0.02 Archaeplastida
Solyc08g075480.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
Zm00001e012402_P001 No alias neoxanthin cleavage protein 0.12 Archaeplastida
Zm00001e032833_P001 No alias neoxanthin cleavage protein 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 106 573
No external refs found!