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  5. LOC_Os07g10620.1

LOC_Os07g10620.1


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0009836 (LandPlants) Phylogenetic Tree(s): OG_05_0009836_tree ,
OG_06_0008062 (SeedPlants) Phylogenetic Tree(s): OG_06_0008062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g10620.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00199600 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00141p00103540 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G80240 No alias Protein of unknown function, DUF642 0.05 Archaeplastida
AT2G41810 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.06 Archaeplastida
AT5G11420 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT5G14150 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
GSVIVT01033286001 No alias No description available 0.02 Archaeplastida
Gb_04470 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_11174 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_14930 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g42520.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g11040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434741g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10435058g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_201516g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_251322g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_4501g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_54830g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6019571g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_89188g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9163727g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g120040.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g015610.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g067030.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g042930.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e006089_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007711_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007713_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019773_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029029_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 218 395
IPR006946 DUF642 40 207
No external refs found!