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  5. AMTR_s00008p00200880

AMTR_s00008p00200880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.118

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0001298 (SeedPlants) Phylogenetic Tree(s): OG_06_0001298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00200880
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G67856 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G76410 ATL8 RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.04 Archaeplastida
AT2G18670 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G05200 ATL6 RING/U-box superfamily protein 0.05 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.04 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.05 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.07 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00020563.21 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04645 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_05004 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.03 Archaeplastida
Gb_07702 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.05 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_30879 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.03 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os01g20910.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g40020.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g39936.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os12g42530.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g42540.1 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_101154g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10433358g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10434759g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_1252g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_227897g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_465316g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_479316g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_611616g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_77628g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_786911g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_83882g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.09 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc03g083460.3.1 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g087860.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e003426_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e023832_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 150 195
No external refs found!