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  5. AT1G30920

AT1G30920


Description : F-box family protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30920
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G19160 No alias F-box family protein 0.02 Archaeplastida
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G30780 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G30925 No alias phospholipase Cs 0.05 Archaeplastida
AT1G31080 No alias F-box family protein 0.03 Archaeplastida
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G46840 No alias F-box family protein 0.06 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G52490 No alias CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like... 0.06 Archaeplastida
AT1G52495 No alias No description available 0.02 Archaeplastida
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G53815 No alias F-box family protein 0.03 Archaeplastida
AT1G59690 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G67130 No alias F-box family protein 0.07 Archaeplastida
AT2G02890 No alias F-box family protein 0.03 Archaeplastida
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT2G23160 No alias F-box family protein 0.07 Archaeplastida
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G10790 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT5G50220 No alias F-box family protein 0.02 Archaeplastida
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 214 341
IPR001810 F-box_dom 9 47
No external refs found!