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  5. LOC_Os07g38360.2

LOC_Os07g38360.2


Description : circadian clock regulator (TIC)


Gene families : OG0008373 (Archaeplastida) Phylogenetic Tree(s): OG0008373_tree ,
OG_05_0007356 (LandPlants) Phylogenetic Tree(s): OG_05_0007356_tree ,
OG_06_0004470 (SeedPlants) Phylogenetic Tree(s): OG_06_0004470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38360.2
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00067500 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.TIC circadian... 0.02 Archaeplastida
GSVIVT01001149001 No alias Multi-process regulation.circadian clock.TIC circadian... 0.03 Archaeplastida
GSVIVT01017938001 No alias Multi-process regulation.circadian clock.TIC circadian... 0.02 Archaeplastida
Gb_04775 No alias circadian clock regulator (TIC) 0.02 Archaeplastida
Zm00001e010586_P004 No alias No annotation 0.03 Archaeplastida
Zm00001e035306_P001 No alias circadian clock regulator (TIC) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!