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  5. LOC_Os07g40300.1

LOC_Os07g40300.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g40300.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
LOC_Os06g10470.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_123573g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc05g009170.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e009853_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e013379_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!