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  5. LOC_Os08g05480.1

LOC_Os08g05480.1


Description : Putative F-box protein PP2-B2 OS=Arabidopsis thaliana (sp|q9zvr5|pp2b2_arath : 135.0)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0015430 (SeedPlants) Phylogenetic Tree(s): OG_06_0015430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g05480.1
Cluster HCCA: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003906001 No alias F-box protein PP2-B1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01019344001 No alias Lectin OS=Luffa acutangula 0.04 Archaeplastida
MA_10430103g0010 No alias F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10434357g0020 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435450g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g08170.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g099990.3.1 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g056680.2.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g083730.2.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
Solyc12g044930.3.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e040260_P002 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 119 297
No external refs found!