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  5. LOC_Os08g07540.1

LOC_Os08g07540.1


Description : adaptor component ClpF of chloroplast Clp-type protease complex


Gene families : OG0006884 (Archaeplastida) Phylogenetic Tree(s): OG0006884_tree ,
OG_05_0006165 (LandPlants) Phylogenetic Tree(s): OG_05_0006165_tree ,
OG_06_0005925 (SeedPlants) Phylogenetic Tree(s): OG_06_0005925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g07540.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT2G03390 No alias uvrB/uvrC motif-containing protein 0.05 Archaeplastida
GSVIVT01012177001 No alias Protein degradation.peptidase families.serine-type... 0.07 Archaeplastida
Gb_13503 No alias adaptor component ClpF of chloroplast Clp-type protease complex 0.05 Archaeplastida
MA_10435225g0010 No alias adaptor component ClpF of chloroplast Clp-type protease complex 0.07 Archaeplastida
MA_144634g0010 No alias Clp protease adapter protein ClpF, chloroplastic... 0.03 Archaeplastida
MA_31905g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g21940.1 No alias adaptor component ClpF of chloroplast Clp-type protease complex 0.05 Archaeplastida
Solyc05g012620.4.1 No alias adaptor component ClpF of chloroplast Clp-type protease complex 0.04 Archaeplastida
Zm00001e028994_P002 No alias adaptor component ClpF of chloroplast Clp-type protease complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011722 Hemimethylated_DNA-bd_dom 204 297
IPR001943 UVR_dom 158 186
No external refs found!