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  5. LOC_Os08g09380.1

LOC_Os08g09380.1


Description : Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana (sp|q9s9v9|fbl23_arath : 102.0)


Gene families : OG0000331 (Archaeplastida) Phylogenetic Tree(s): OG0000331_tree ,
OG_05_0000701 (LandPlants) Phylogenetic Tree(s): OG_05_0000701_tree ,
OG_06_0003961 (SeedPlants) Phylogenetic Tree(s): OG_06_0003961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09380.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g21240.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os08g09220.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os08g09460.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os08g09470.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os08g09600.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os08g09650.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc08g013805.2.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e037423_P003 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e037424_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 15 59
No external refs found!