1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g12400.1

LOC_Os08g12400.1


Description : no hits & (original description: none)


Gene families : OG0000098 (Archaeplastida) Phylogenetic Tree(s): OG0000098_tree ,
OG_05_0000033 (LandPlants) Phylogenetic Tree(s): OG_05_0000033_tree ,
OG_06_0000010 (SeedPlants) Phylogenetic Tree(s): OG_06_0000010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g12400.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.23 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g06200.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g19660.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g29370.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g35380.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g35470.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g66450.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g21790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25440.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g27630.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g28770.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g33260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g35280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g03240.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os03g29660.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g31640.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g33290.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g52550.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g05680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g09270.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g09710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g13020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g14870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g19910.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g21380.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g24080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g24390.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g04430.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g16680.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g17970.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g18910.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g20370.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g20820.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g24840.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g24950.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g28560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g31430.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g41860.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os06g27950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g29060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g29750.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g45530.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os06g47370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g48460.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g07830.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os07g14950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g14970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g20690.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g26800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g44520.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g45710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g07230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g13560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g13610.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g27300.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os09g01350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g07690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g08240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g09800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g11030.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os09g11950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g14740.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g15140.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g22350.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g12280.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os10g17230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g22260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g31600.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g07720.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g15100.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g22020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g22710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g24920.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g28560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g28720.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g33060.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g05500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g14270.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os12g16820.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g18030.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os12g21770.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g23010.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g26740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g27700.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g28280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g28340.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!