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  5. LOC_Os08g15292.1

LOC_Os08g15292.1


Description : component PetD/IV of cytochrome b6/f complex


Gene families : OG0007254 (Archaeplastida) Phylogenetic Tree(s): OG0007254_tree ,
OG_05_0006833 (LandPlants) Phylogenetic Tree(s): OG_05_0006833_tree ,
OG_06_0007078 (SeedPlants) Phylogenetic Tree(s): OG_06_0007078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g15292.1
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
ATCG00730 PETD photosynthetic electron transfer D 0.07 Archaeplastida
Gb_03953 No alias component PetD/IV of cytochrome b6/f complex 0.2 Archaeplastida
LOC_Os01g57945.1 No alias component PetD/IV of cytochrome b6/f complex 0.09 Archaeplastida
LOC_Os04g16844.1 No alias component PetD/IV of cytochrome b6/f complex 0.09 Archaeplastida
LOC_Os10g21326.1 No alias component PetD/IV of cytochrome b6/f complex 0.09 Archaeplastida
Mp1g00750.1 No alias Cytochrome b6-f complex subunit 4 OS=Pinus thunbergii... 0.03 Archaeplastida
Solyc00g500028.1.1 No alias Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.1 Archaeplastida
Solyc00g500073.1.1 No alias Cytochrome b6 OS=Helianthus annuus (sp|q1kxs9|cyb6_helan : 261.0) 0.12 Archaeplastida
Solyc00g500158.1.1 No alias component PetD/IV of cytochrome b6/f complex 0.1 Archaeplastida
Solyc01g017430.1.1 No alias Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0031647 regulation of protein stability IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0042301 phosphate ion binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
BP GO:0050821 protein stabilization IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005798 Cyt_b/b6_C 44 133
No external refs found!